Information for 10-GCYAAMATWKKCW (Motif 12)

A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
Reverse Opposite:
C G A T A C T G G T C A G T C A C G T A C G T A A C G T A C T G A C G T A C G T C T A G A C T G A G T C
p-value:1e-12
log p-value:-2.926e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 16.6bp
Average Position of motif in Background47.5 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCYAAMATWKKCW
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCYAAMATWKKCW
TGCCAA--------
 A C G T A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCYAAMATWKKCW
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCYAAMATWKKCW--
TGCCAAAATAAACANN
 A C G T A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCYAAMATWKKCW--
-CTAATATTGCTAAA
 A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCYAAMATWKKCW--
-CTAATATTGCTAAA
 A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

OLIG1/MA0826.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCYAAMATWKKCW
---AACATATGTT
 A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCYAAMATWKKCW-
--AAACATATGTTT
 A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCYAAMATWKKCW
---ACCATATGTT
 A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCYAAMATWKKCW
---ACCATATGTT
 A C T G A G T C G A T C C G T A C G T A G T A C C G T A A C G T C G A T A C G T A C G T G T A C C G T A
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T