Information for 3-GCCAGRGGGAGGCAGG (Motif 2)

A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
Reverse Opposite:
A G T C G T A C A C G T C A T G A T G C A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T A C T G A C T G T G A C
p-value:1e-18
log p-value:-4.158e+01
Information Content per bp:1.782
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.1 +/- 20.5bp
Average Position of motif in Background63.8 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCAGRGGGAGGCAGG
TGTCAGGGGGCG-----
 A C G T A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGRGGGAGGCAGG-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCAGRGGGAGGCAGG
NNNNGGGGGAAGANGG
 A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGRGGGAGGCAGG
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCCAGRGGGAGGCAGG
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCAGRGGGAGGCAGG
---GGCGGGAARN---
 A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGRGGGAGGCAGG
NNNAAGGGGGCGGGNNN
 A C G T A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCAGRGGGAGGCAGG
-GGAGGGGGAA-----
 A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGRGGGAGGCAGG
DCHCAGCAGGRGGCC--
 A C G T A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCAGRGGGAGGCAGG
--GGGCGGGAAGG---
 A C T G G T A C G T A C C G T A A C T G C T A G A C T G A C T G A C T G G T C A C T A G A T C G G A T C C G T A A C T G C T A G
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T