Information for 7-TGGCAGCCKTGCTCTG (Motif 6)

A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
Reverse Opposite:
G T A C C T G A C T A G C T G A A C T G A G T C T C G A G T A C A T C G A C T G A G T C A C G T A C T G A T G C G T A C T G C A
p-value:1e-14
log p-value:-3.255e+01
Information Content per bp:1.768
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.7 +/- 31.0bp
Average Position of motif in Background45.4 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGCAGCCKTGCTCTG
TCCCAGMCRAGCCCC-
 A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCCKTGCTCTG
CTTGGCAA----------
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGCAGCCKTGCTCTG
--CCAGACRSVB----
 A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGGCAGCCKTGCTCTG
AGGTGHCAGACA-------
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCCKTGCTCTG
VBTGWCAGCB--------
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCCKTGCTCTG
CTGGCAGNCTGCCA---
 A C G T A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGGCAGCCKTGCTCTG
--BCAGACWA------
 A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCCKTGCTCTG
TTGACAGC---------
 A C G T A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGCCKTGCTCTG
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.51
Offset:10
Orientation:forward strand
Alignment:TGGCAGCCKTGCTCTG
----------GCTCCG
 A C G T A C T G A T C G A G T C C G T A A C T G T G A C A T G C C A T G A G C T A C T G A G T C A G C T A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G