Information for 17-GATGCTCCAAGTA (Motif 33)

A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A
Reverse Opposite:
A C G T C T G A A G T C A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A A C G T A G T C
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.951
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets16.0 +/- 5.7bp
Average Position of motif in Background56.9 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GATGCTCCAAGTA
---GCTCCG----
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GATGCTCCAAGTA
NATGTTGCAA---
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATGCTCCAAGTA
CNGTCCTCCC----
 A C G T A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GATGCTCCAAGTA-
------CCAATTAA
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GATGCTCCAAGTA-------
---ACTCCAAGTACTTGGAA
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GATGCTCCAAGTA
--ATTTCCAAGAA
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A
A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

MSX1/MA0666.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GATGCTCCAAGTA-
------CCAATTAG
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GATGCTCCAAGTA-
AGATGCTRCTRCCHT
 A C G T A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GATGCTCCAAGTA-
------CCAATTAA
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GATGCTCCAAGTA
GAANNTTCTAGAA
 A C T G C G T A C G A T A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G A G C T C G T A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A