Information for 15-CTAGACTTGYCTW (Motif 30)

A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
Reverse Opposite:
C G T A C G T A A C T G T C G A A G T C G T C A C G T A A T C G A C G T A G T C A C G T C G T A A T C G
p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 28.8bp
Average Position of motif in Background68.3 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTAGACTTGYCTW
--NNACTTGCCTT
 A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTAGACTTGYCTW
CGTCTAGACA------
 A C G T A C G T A C G T A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:3
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CTAGACTTGYCTW
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTAGACTTGYCTW
-TTGACTTTT---
 A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTAGACTTGYCTW
BCAGACWA-----
 A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTAGACTTGYCTW----
--AGAAATGACTTCCCT
 A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTAGACTTGYCTW
TTCTAGAABNTTCTA
 A C G T A C G T A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGACTTGYCTW
CCAGACRSVB---
 A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACTTGYCTW
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

TP73/MA0861.1/Jaspar

Match Rank:10
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------CTAGACTTGYCTW
GACATGTCNNGACATGTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T C G T A A C T G G T C A A T G C A C G T A C G T A C T G A G C T A G T C A C G T C G A T
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C A C G T A C G T