Information for 2-CTGTCCCTGT (Motif 7)

A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T
Reverse Opposite:
C G T A T A G C C T G A C T A G T C A G T C A G G C T A T A G C G C T A T C A G
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.650
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif18.11%
Number of Background Sequences with motif4732.3
Percentage of Background Sequences with motif10.09%
Average Position of motif in Targets51.8 +/- 23.9bp
Average Position of motif in Background49.8 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTGTCCCTGT
CTGTTCCTGG
 A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCCTGT
BNTGDCCTTG-
 A C G T A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCCTGT-
ACTTTCACTTTC
 A C G T A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCCCTGT--
TCACTTTCACTTTCN
 A C G T A C G T A C G T A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTGTCCCTGT-
-----GCTGTG
 A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGTCCCTGT-
-TGACCTTGAV
 A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCCTGT----
GCTGACCTTGAACTN
 A C G T A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTCCCTGT-
-TGACCTTGAN
 A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTCCCTGT
-TGACCT---
 A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCCCTGT---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C C G A T A T C G C G A T A G T C A G T C G A T C G A C T A T C G G C A T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G