Information for 1-GCAGCCAYTCTYTCCA (Motif 4)

C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G G T C A C T A G C G T A A T C G C G T A C T G A C A G T A C T G A C T G A G T C C G A T C A T G G T A C
p-value:1e-13
log p-value:-3.116e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.3 +/- 25.7bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCCAYTCTYTCCA---
NTGACTCANTTTTTCCANTN
 A C G T C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GCAGCCAYTCTYTCCA--
--------ATTTTCCATT
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAGCCAYTCTYTCCA
GCNGCCATCTTG----
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCAGCCAYTCTYTCCA--
--------ATTTTCCATT
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCAGCCAYTCTYTCCA--
--------ATTTTCCATT
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCAGCCAYTCTYTCCA
---NCCATTGTTY---
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GCAGCCAYTCTYTCCA--
--------ATTTTCCATT
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCAGCCAYTCTYTCCA
BCAGACWA--------
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCAYTCTYTCCA
ACTAGCCAATCA-----
 A C G T C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCAGCCAYTCTYTCCA
----CCATTGTTTT--
 C A T G G A T C C G T A A C T G G T A C A G T C G C T A A G C T C G A T A T G C A C G T A G T C A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T