Information for 4-CAGCTCTGCCTCACAG (Motif 5)

A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G C A G T A C T G C T G A C T A G A C T G T G A C C T G A T C A G T C G A A C T G A T G C A C G T A C T G
p-value:1e-10
log p-value:-2.404e+01
Information Content per bp:1.805
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif34.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.5 +/- 25.3bp
Average Position of motif in Background58.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGCTCTGCCTCACAG
NAGCCCCGCCCCCN--
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:CAGCTCTGCCTCACAG-
-----------CACAGN
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGCTCTGCCTCACAG
---CACTTCCTCT---
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGCTCTGCCTCACAG
--GCTCGGSCTC----
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGCTCTGCCTCACAG
-KGCCCTTCCCCA---
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAGCTCTGCCTCACAG
TGCAGCTGTCCCT-----
 A C G T A C G T A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGCTCTGCCTCACAG
CAGCC-----------
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAGCTCTGCCTCACAG
--GCCCCGCCCCC---
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAGCTCTGCCTCACAG
--CCCCTCCCCCAC--
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGCTCTGCCTCACAG
CAGCTGTT--------
 A G T C C G T A A T C G A G T C A C G T A G T C A G C T A C T G A G T C A G T C A G C T A G T C G T C A A G T C G T C A A C T G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T