Information for 5-CTTGCCTGGCTTT (Motif 15)

G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
Reverse Opposite:
C T G A C T G A C T G A A C T G G A T C A G T C C T G A C T A G A C T G T A G C C G T A C G T A A C T G
p-value:1e-7
log p-value:-1.634e+01
Information Content per bp:1.803
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.7 +/- 28.4bp
Average Position of motif in Background38.8 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCTGGCTTT
NNACTTGCCTT-----
 A C G T A C G T A C G T G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTGCCTGGCTTT
ATTTCCTGTN---
 G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTGCCTGGCTTT
ATTTCCTGTN---
 G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCTGGCTTT
NNACTTACCTN-----
 A C G T A C G T A C G T G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTTGCCTGGCTTT-
-----TTGACTTTT
 G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTTGCCTGGCTTT-
----BNTGDCCTTG
 G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTTGCCTGGCTTT
--GGTCTGGCAT-
 G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTTGCCTGGCTTT
-TTGCGTGCVA--
 G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCCTGGCTTT
CACTTCCTGT----
 A C G T G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTTGCCTGGCTTT
TGACCTTTCGTGACCTT
 A C G T A C G T A C G T A C G T G T A C A C G T C G A T A T C G A G T C A G T C A G C T A C T G C A T G A G T C G A C T A G C T A G C T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T