Information for 5-AGGTGGASCC (Motif 7)

C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C
Reverse Opposite:
A T C G A C T G A T G C A C G T A G T C G T A C C T G A A T G C A G T C G C A T
p-value:1e-13
log p-value:-3.215e+01
Information Content per bp:1.683
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif10.39%
Number of Background Sequences with motif1855.5
Percentage of Background Sequences with motif3.92%
Average Position of motif in Targets47.6 +/- 28.5bp
Average Position of motif in Background50.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGASCC--
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGGTGGASCC--
--GTGGGCCCCA
 C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C A C G T A C G T
A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGASCC-----
TTGGGGGCGCCCCTAG
 A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGASCC
NNCAGGTGNN---
 A C G T A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGTGGASCC
RGKGGGCGGAGC-
 A C G T A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGGASCC
GGGGGCGGGGCC
 A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGTGGASCC-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGASCC----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGTGGASCC
--GTGGAT--
 C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGASCC
SDGCAGGTGCNS--
 A C G T A C G T A C G T A C G T C G T A T C A G T A C G G A C T A C T G T C A G T G C A T A C G T G A C T A G C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T