Information for 21-TTGTCACTGCCAACTC (Motif 36)

A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C C G T A C G T A
p-value:1e-5
log p-value:-1.213e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 16.8bp
Average Position of motif in Background38.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
-----GGTGCCAAGT-
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
------ATGCCAACC-
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
------TTGCCAAG--
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
-----CGTGCCAAG--
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TTGTCACTGCCAACTC
-------TGCCAA---
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
CAATCACTGGCAGAAT
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
-AGTCACGC-------
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC---
---ACTATGCCAACCTACC
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTGTCACTGCCAACTC
NTGTCAN---------
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGTCACTGCCAACTC
--CCAACTGCCA----
 A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A G T C
A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T