Information for 21-GCTCTGAAAAAGC (Motif 33)

A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 32.2bp
Average Position of motif in Background69.6 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTCTGAAAAAGC
GCTCGTAAAAA--
 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCTCTGAAAAAGC
----TGGAAAA--
 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTCTGAAAAAGC
AAATAAGAAAAAAC
 A C G T A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCTCTGAAAAAGC
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTCTGAAAAAGC
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTCTGAAAAAGC
--NATGGAAAAN-
 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCTCTGAAAAAGC
GAAAAGGTGTGAAAATT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTCTGAAAAAGC
-GNCTATAAAAGG
 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTCTGAAAAAGC
AGTCGTAAAAA--
 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTCTGAAAAAGC----
GTTCAAAAAAAAAATTC
 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C