Information for 20-CACCAGGVAVCGCACC (Motif 29)

A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
Reverse Opposite:
A C T G C T A G G C A T C A T G A T G C A C T G A T G C A C G T A T C G A G T C A T G C A C G T A C T G A C T G C A G T T C A G
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.732
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif26.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.0 +/- 19.0bp
Average Position of motif in Background41.2 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CACCAGGVAVCGCACC
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CACCAGGVAVCGCACC
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACCAGGVAVCGCACC
-ANCAGGATGT-----
 A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CACCAGGVAVCGCACC
--ACAGGAAGTG----
 A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACCAGGVAVCGCACC
-AVCAGGAAGT-----
 A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACCAGGVAVCGCACC
TTCCNGGAAG------
 A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CACCAGGVAVCGCACC
NNNCTTTCCAGGAAA------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CACCAGGVAVCGCACC
TCCCNNGGGACN-----
 A C G T A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGGVAVCGCACC
NCTTCCNGGAAGNN----
 A C G T A C G T A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CACCAGGVAVCGCACC
-ACCCGGAAGTA----
 A G T C G T C A A G T C G T A C T G C A A T C G A C T G T A G C C G T A T A C G G T A C A T C G G A T C C G T A A G T C G T A C
A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T