p-value: | 1e-8 |
log p-value: | -1.972e+01 |
Information Content per bp: | 1.760 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.53% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 65.8 +/- 9.4bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGAATGGTCCATTCAV ---ATGCATAATTCA- |
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PB0028.1_Hbp1_1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGAATGGTCCATTCAV--- ---NNCATTCATTCATNNN |
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NFYB/MA0502.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGAATGGTCCATTCAV -AAATGGACCAATCAG |
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PB0137.1_Irf3_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGAATGGTCCATTCAV GGAGAAAGGTGCGA---- |
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OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGAATGGTCCATTCAV TCATGAATWATTCAT---- |
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Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGAATGGTCCATTCAV---- NTAATTDGCYAATTANNWWD |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | TGAATGGTCCATTCAV------ --------ACATTCATGACACG |
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PB0068.1_Sox1_1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGAATGGTCCATTCAV----- -----AATCAATTCAATAATT |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGAATGGTCCATTCAV NNATNAATTGTTTNN---- |
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NFYA/MA0060.2/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TGAATGGTCCATTCAV------ ----TGGACCAATCAGCACTCT |
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