Information for 17-AGCGCCACACTGG (Motif 25)

C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C T G A G T C C T A G A T G C C G A T
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 22.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCACACTGG
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCACACTGG
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCGCCACACTGG
TTTGGCGCCAAA----
 A C G T A C G T A C G T C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCACACTGG
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCACACTGG
AGGTGHCAGACA--
 A C G T C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCGCCACACTGG
CGTGCCAAG----
 C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGCGCCACACTGG
-----AACAAAGG
 C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGCGCCACACTGG------
---CAATCACTGGCAGAAT
 C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCACACTGG
AGGTGNCAGACAG-
 A C G T C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGCGCCACACTGG
--TGCCAA-----
 C G T A A T C G A G T C A C T G A G T C A G T C C G T A G T A C C G T A A G T C A C G T A C T G A C T G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T