Information for 15-GGCATACGAAAGG (Motif 23)

A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
Reverse Opposite:
A G T C A T G C A C G T A C G T A C G T A T G C A T C G A C G T C T G A A G C T A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.791
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 20.6bp
Average Position of motif in Background49.4 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCATACGAAAGG
ATTTGCATAACAAAG-
 A C G T A C G T A C G T A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCATACGAAAGG
NGTGGGCAT--------
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCATACGAAAGG
GGTTGGCAT--------
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCATACGAAAGG--
GGAAANTGAAACTNA
 A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GGCATACGAAAGG
NNNNTTGGGCACNNCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCATACGAAAGG
---ACATCAAAGG
 A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGCATACGAAAGG
TCTTTGGCGTACCCTAA-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCATACGAAAGG--
---ACATCAAAGGNA
 A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCATACGAAAGG
ATTTGCATAACAATG-
 A C G T A C G T A C G T A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGCATACGAAAGG--
-AAAGATCAAAGGAA
 A C T G A C T G G T A C C T G A A G C T T G C A T A G C T A C G C G T A C G T A C G T A T A C G C T A G A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A