Information for 14-CTTTGTTCACCAA (Motif 22)

A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T A C T G C G T A C G T A A G T C G T C A C T G A C T G A A C T G
p-value:1e-8
log p-value:-2.000e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 19.1bp
Average Position of motif in Background38.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCACCAA
YCTTTGTTCC----
 A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTCACCAA
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTCACCAA
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCACCAA---
ACTTAGTTAACTAAAAA
 A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCACCAA---
CCTTAGTTAACTAAAAT
 A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTCACCAA
CCWTTGTYYB----
 A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTTTGTTCACCAA
NCCATTGTTC-----
 A C G T A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTTGTTCACCAA
NYYTGTTTACHN-
 A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTTTGTTCACCAA
GAGCCCTTGTCCCTAA-
 A C G T A C G T A C G T A C G T A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTTGTTCACCAA----
---GGTTCCNNAATTTG
 A G T C A G C T A G C T A C G T A C T G A C G T A C G T A G T C G T C A A G T C G T A C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G