Information for 9-TGCCTTTTMA (Motif 19)

C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A
Reverse Opposite:
C G A T A C G T C G T A T G C A T G C A C G T A C T A G A C T G T A G C G C T A
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.703
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif11.45%
Number of Background Sequences with motif2664.2
Percentage of Background Sequences with motif5.63%
Average Position of motif in Targets48.3 +/- 26.4bp
Average Position of motif in Background50.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGCCTTTTMA----
--CCTTTTATAGNC
 C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCCTTTTMA
AACCTTATAT
 C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTTTTMA
NNACTTGCCTT----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTTTTMA
TTGACTTTT--
 A C G T C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCCTTTTMA--
TGACCTTTNCNT
 C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTMA--
TNCCATATATGG
 C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A A C G T A C G T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTTTTMA
ACTTCCTGNT--
 A C G T A C G T C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTMA----
TNCCATATATGGNA
 C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A A C G T A C G T A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCCTTTTMA-
-ANCGTTTANN
 C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCCTTTTMA
GTCCGCCATTA--
 A C G T A C G T A C G T C G A T A T C G A G T C A G T C G C A T A C G T A C G T C G A T T G C A G C T A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T