Information for 8-TGATTTAAAT (Motif 9)

C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T
Reverse Opposite:
C G T A C A G T A C G T A C G T C G T A C G T A T G C A C A G T G T A C C G T A
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.829
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif279.0
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets53.0 +/- 24.1bp
Average Position of motif in Background46.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TGATTTAAAT-
--ATTTGAATT
 C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGATTTAAAT
CNGTGATTTN---
 A C G T A C G T A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGATTTAAAT-
TGATTAAATTA
 C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

DUXA/MA0884.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTAAAT--
NTGATTAAATTAN
 A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTAAAT-
CTCATTTGCATW
 A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGATTTAAAT-
--ATTTGCATA
 C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGATTTAAAT--
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTAAAT--
NTGATTTATGGCC
 A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATTTAAAT---
NWTGATTRGRTTAWN
 A C G T A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T A C G T A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGATTTAAAT
CGGTTTCAAA-
 A C G T C G A T A C T G G T C A A C G T A C G T G C A T G T C A C G T A G T C A C G A T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T