Information for 4-AMAGGASAGAGCACAC (Motif 9)

C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
Reverse Opposite:
A C T G C A G T A C T G A C G T C T A G G T A C A G C T A G T C A C G T A T G C A C G T A G T C G T A C A G C T C A T G A C G T
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 20.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AMAGGASAGAGCACAC-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AMAGGASAGAGCACAC
CANAGNNCAAAGTCCA-
 A C G T C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AMAGGASAGAGCACAC
CAGCATGACTCAGCA---
 A C G T A C G T C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A A C G T A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AMAGGASAGAGCACAC
-GATGACTCAGCA---
 C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
A C G T T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AMAGGASAGAGCACAC
ANGNAAAGGTCA--------
 A C G T A C G T A C G T A C G T C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AMAGGASAGAGCACAC
-TAGGGCAAAGGTCA-
 C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AMAGGASAGAGCACAC
--ATGACTCAGCAD--
 C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C
A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AMAGGASAGAGCACAC-
AAAGGTCAAAGGTCAAC
 C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AMAGGASAGAGCACAC--
---TGACANARRCCAGRC
 C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

MAF::NFE2/MA0501.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AMAGGASAGAGCACAC-
--ATGACTCAGCAATTT
 C G T A G T A C C T G A A C T G A C T G C G T A A T C G C G T A T A C G C T G A A C T G A G T C C G T A A G T C G T C A T G A C A C G T
A C G T A C G T T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T