Information for 3-CATGRCCACAGCA (Motif 9)

A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A
Reverse Opposite:
C A G T A T C G T G A C C G A T A C T G A C G T C T A G A C T G A G T C T G A C C G T A A C G T T A C G
p-value:1e-34
log p-value:-8.007e+01
Information Content per bp:1.630
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif7.44%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets48.7 +/- 21.6bp
Average Position of motif in Background59.3 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATGRCCACAGCA-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATGRCCACAGCA
-ATGACGTCAYYN
 A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

JUN/MA0488.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATGRCCACAGCA-
-ATGACATCATCNN
 A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CATGRCCACAGCA-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PH0014.1_Cphx/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATGRCCACAGCA--
-ATGATCGAATCAAA
 A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A A C G T A C G T
A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATGRCCACAGCA
--AAACCACAGC-
 A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CATGRCCACAGCA
TTGCCATGGCAACN---
 A C G T A C G T A C G T A C G T A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATGRCCACAGCA--
NATGACATCATCNNN
 A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATGRCCACAGCA
-ATGACGTCATCN
 A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATGRCCACAGCA
SCCTAGCAACAG--
 A C G T A T G C G T C A A C G T A C T G C T A G T G A C G A T C T G C A T G A C G C T A A C T G T A G C G T C A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T