Information for 23-GGAGTGGGGA (Motif 27)

C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
Reverse Opposite:
G C A T G A T C T G A C G A T C A T G C T C G A A T G C A C G T A G T C A G T C
p-value:1e-16
log p-value:-3.835e+01
Information Content per bp:1.702
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets54.4 +/- 29.9bp
Average Position of motif in Background60.9 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGAGTGGGGA---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GGAGTGGGGA
----TGGGGA
 C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

PB0107.1_Ascl2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTGGGGA---
NATNGGGNGGGGANAN
 A C G T A C G T A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

SP3/MA0746.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTGGGGA
GGGGGCGTGGN--
 A C G T A C G T A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGTGGGGA
GGGGNGGGGC
 C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGTGGGGA
TTRAGTGSYK-
 A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGGGGA
GGGGGCGGGGC
 A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAGTGGGGA
GGGGGGGG--
 C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGTGGGGA
BTBRAGTGSN--
 A C G T A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTGGGGA
AGTGGGCGTGGC--
 A C G T A C G T A C G T A C G T C T A G T C A G G T C A T A C G A G C T T A C G C T A G A C T G C T A G C G T A
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T