Information for 11-ACTAAATTTC (Motif 11)

G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C
Reverse Opposite:
C T A G C T G A G T C A C G T A G C A T C A G T G C A T G C T A C T A G C G A T
p-value:1e-28
log p-value:-6.474e+01
Information Content per bp:1.645
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.62%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets58.0 +/- 26.5bp
Average Position of motif in Background32.6 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACTAAATTTC----
GGACTGAATTCATGCC
 A C G T A C G T G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ACTAAATTTC
GATTAATTAATTT-
 A C G T A C G T A C G T A C G T G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACTAAATTTC
NTAATBNAATTA-
 A C G T A C G T A C G T G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACTAAATTTC
TAATTAAATTA-
 A C G T A C G T G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACTAAATTTC---
---GCATTCCAGN
 G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACTAAATTTC--
--CACATTCCAT
 G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C A C G T A C G T
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

PH0046.1_Hoxa10/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTAAATTTC---
TNAATTTTATTACCTN
 A C G T A C G T A C G T G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ACTAAATTTC-----
-----ATTTCCTGTN
 G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTAAATTTC
TTTTTATTGC
 G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTAAATTTC--
ACTACAATTCCC
 G C T A G A T C C G A T C G T A G T C A C G T A A C G T C A G T G A C T G A T C A C G T A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C