Information for 16-SAAARTMTGYCCYCMA (Motif 27)

T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
Reverse Opposite:
A C G T C A G T A T C G C T A G C T A G C T A G T C G A A G T C C T G A A C G T T G C A A G T C C G A T A C G T C G A T A T G C
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.595
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif224.3
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets40.6 +/- 23.9bp
Average Position of motif in Background50.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-SAAARTMTGYCCYCMA
GRACAGWMTGTYCTB--
 A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-SAAARTMTGYCCYCMA
GVACAGNMTGTYCTB--
 A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--SAAARTMTGYCCYCMA
AGNACAGNCTGTTCTN--
 A C G T A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--SAAARTMTGYCCYCMA
AGNACANNNTGTNCTN--
 A C G T A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-SAAARTMTGYCCYCMA
GAACADWATGTTCTT--
 A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SAAARTMTGYCCYCMA
GGGAACACAATGTTCCC--
 A C G T A C G T A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SAAARTMTGYCCYCMA----
---AGGAGACCCCCAATTTG
 T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:SAAARTMTGYCCYCMA
---------TCCCCA-
 T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---SAAARTMTGYCCYCMA
GGGTACATAATGTTCCC--
 A C G T A C G T A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---SAAARTMTGYCCYCMA
NGGTACACNGTGTTCCC--
 A C G T A C G T A C G T T A C G C G T A G T C A C G T A T C A G A C G T T G C A G A C T C T A G A G C T A G T C A G T C G A T C A T G C G T C A T G C A
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C A C G T A C G T