Information for 15-AATAACACTCAAGGCA (Motif 25)

T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C G A C T A C G T T A C G G C T A A T C G A G C T C A T G A C G T A C G T C G T A A C G T A G C T
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.701
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif40.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.9 +/- 23.0bp
Average Position of motif in Background50.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AATAACACTCAAGGCA
--AGCCACTCAAG---
 T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AATAACACTCAAGGCA
CAAACAACAACACCT------
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AATAACACTCAAGGCA
---RSCACTYRAG---
 T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AATAACACTCAAGGCA
AAAAATAACAAACGG----
 A C G T A C G T A C G T T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AATAACACTCAAGGCA
--MRSCACTYAA----
 T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AATAACACTCAAGGCA
--AAGCACTTAA----
 T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----AATAACACTCAAGGCA
CTACCAATAAAATTCT-----
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----AATAACACTCAAGGCA
AATGCAATAAAATTTAT----
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----AATAACACTCAAGGCA
TAGGTAATAAAATTCA-----
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AATAACACTCAAGGCA--
----ACATTCATGACACG
 T C G A C G T A A C G T T G C A G T C A G A T C C T G A A T G C C G A T A T G C G T C A C T G A C T A G C T A G G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G