Information for 13-CAAGGABCTTTTC (Motif 24)

A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
Reverse Opposite:
A T C G C T G A G T C A C G T A T C G A A C T G T A C G A C G T A G T C A G T C A C G T A C G T A C T G
p-value:1e-9
log p-value:-2.190e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.3 +/- 21.3bp
Average Position of motif in Background32.2 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGGABCTTTTC
NTCAAGGTCA-----
 A C G T A C G T A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAGGABCTTTTC
-AAGGATATNTN-
 A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAGGABCTTTTC
CAAGGHCANV---
 A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGABCTTTTC
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAGGABCTTTTC
BTCAAGGTCA-----
 A C G T A C G T A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAAGGABCTTTTC--
---TGACCTTTNCNT
 A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAAGGABCTTTTC
NRRGGGTCTT---
 A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGGABCTTTTC
TTCAAGGTCAT----
 A C G T A C G T A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGABCTTTTC
ACAAAGGNBCCT--
 A C G T A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAAGGABCTTTTC
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G G T C A A G T C A G T C A C G T C G A T A C G T A G C T A T G C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A