Information for 12-GCCCTTGGAGTCAGTG (Motif 20)

T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
Reverse Opposite:
A G T C G C T A G T A C C G A T A C T G G T C A G T A C C A G T A G T C G A T C C G T A G C T A C T A G C T A G C T A G A G T C
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.639
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif53.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets43.2 +/- 24.7bp
Average Position of motif in Background46.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGAGTCAGTG
TGACCTTGAN-------
 A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGAGTCAGTG
TGACCTTGAV-------
 A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGGAGTCAGTG
GCTGACCTTGAACTN----
 A C G T A C G T A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTGGAGTCAGTG
BNTGDCCTTG---------
 A C G T A C G T A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GCCCTTGGAGTCAGTG
NNNNATGACCTTGANTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCCTTGGAGTCAGTG
-CCTTTGAWGT-----
 T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCCCTTGGAGTCAGTG
------AGAGGAAGTG
 T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTTGGAGTCAGTG
ATGACCTTGAA-------
 A C G T A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTGGAGTCAGTG
NTGACCTTGA--------
 A C G T A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTGGAGTCAGTG
TGACCTTGACCT-----
 A C G T T C A G A G T C G A T C A G T C C A G T C G A T C T A G C T A G G C T A A C T G A C G T T G A C C G T A A C T G C G A T A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T