Information for 2-CTGCTTGBTCCAAAAG (Motif 2)

A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T C A G T C G A T A T C G A T C G G C T A T A C G A T G C C T G A C G T A A C T G A G T C C G T A A T C G
p-value:1e-16
log p-value:-3.857e+01
Information Content per bp:1.738
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 29.2bp
Average Position of motif in Background64.5 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:CTGCTTGBTCCAAAAG---
---------NNATAAGGNN
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CTGCTTGBTCCAAAAG
AGAGTGCTGATTGGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CTGCTTGBTCCAAAAG
--GCTTCC--------
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.46
Offset:6
Orientation:forward strand
Alignment:CTGCTTGBTCCAAAAG-
------ATTGCACAATA
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:CTGCTTGBTCCAAAAG
------VTTRCATAAY
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

CENPB/MA0637.1/Jaspar

Match Rank:6
Score:0.45
Offset:-1
Orientation:forward strand
Alignment:-CTGCTTGBTCCAAAAG
CCCGCATACAACGAA--
 A C G T A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
G A T C G A T C G A T C A C T G A G T C C G T A G A C T T G C A T A G C G C T A T C G A G T A C T C A G G C T A G T C A A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.45
Offset:3
Orientation:forward strand
Alignment:CTGCTTGBTCCAAAAG
---TTCGCGCGAAAA-
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
A C G T A C G T A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.44
Offset:4
Orientation:forward strand
Alignment:CTGCTTGBTCCAAAAG---
----CAATTGCAAAAATAT
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.44
Offset:1
Orientation:forward strand
Alignment:CTGCTTGBTCCAAAAG
-TTTTCCCGCCAAAA-
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.43
Offset:2
Orientation:forward strand
Alignment:CTGCTTGBTCCAAAAG
--NTTTCCNGGAAA--
 A T G C G C A T A C T G A G T C A C G T A G C T A T C G A T G C C G A T A T G C A T G C C G T A G T C A C T G A C G T A A C T G
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T