Information for 18-AGGTGCTGGCCAA (Motif 36)

C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
Reverse Opposite:
A G C T C G A T C T A G A C T G A T G C A G T C C G T A A C T G A G T C C G T A A G T C A G T C A C G T
p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.803
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.6 +/- 18.4bp
Average Position of motif in Background42.8 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGGTGCTGGCCAA
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGTGCTGGCCAA--
AAATTTGCTGACTTAGA
 A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGGCCAA
NNCAGGTGTN------
 A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGGCCAA
NNCAGGTGCG------
 A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGCTGGCCAA
SDGCAGGTGCNS-----
 A C G T A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGGCCAA
GACAGGTGTN------
 A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGTGCTGGCCAA
---TGCTGACTCA
 C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGTGCTGGCCAA
AACAGGTGT-------
 A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGGTGCTGGCCAA
ATCCACAGGTGCGAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGGCCAA
NNCAGGTGNN------
 A C G T A C G T A C G T C G T A C T A G A C T G C G A T T A C G A G T C C G A T A C T G T A C G T A G C A G T C C G T A C T G A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T