Information for 10-GGMASCACAGTGT (Motif 19)

A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C G T A T C G A C G T A C T G A T C G A C G T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.250e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 17.7bp
Average Position of motif in Background84.3 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGMASCACAGTGT
NAAACCACAG---
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGMASCACAGTGT
-AAACCACAGC--
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGMASCACAGTGT
NWAACCACADNN-
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGMASCACAGTGT
-AAACCACAGAN-
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGMASCACAGTGT
-AAACCACANN--
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGMASCACAGTGT----
GGGAACACGGTGTACCC
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGMASCACAGTGT----
GGGAACACAATGTTCCC
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGMASCACAGTGT-
-----GACAATGNN
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGMASCACAGTGT
GCGACCACACTG-
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGMASCACAGTGT
-----CACAGN--
 A C T G A C T G G T C A C G T A A T G C G T A C C G T A A T G C C G T A C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T