Information for 20-GYGTCCMKGYGACSWG (Motif 44)

A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
Reverse Opposite:
A G T C C G T A T A G C A C T G A G C T A G T C C T G A A G T C G T C A A C G T A C T G A C T G C G T A A G T C C T G A A G T C
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.852
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 24.1bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR1/MA0112.3/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GYGTCCMKGYGACSWG
AAGGTCACGGTGACCTG
 A C G T A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GYGTCCMKGYGACSWG-
-TGACCCAGTGACCTAC
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GYGTCCMKGYGACSWG
---GCCACGTGACC--
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GYGTCCMKGYGACSWG
---KCCACGTGAC---
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GYGTCCMKGYGACSWG
AGGNCANNGTGACCT-
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GYGTCCMKGYGACSWG
-GGTCANNGTGACCTN
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GYGTCCMKGYGACSWG
---RTCATGTGAC---
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GYGTCCMKGYGACSWG
---GTCATGTGACC--
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GYGTCCMKGYGACSWG
----TCACGTGACCGG
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GYGTCCMKGYGACSWG
---ACCACGTGAC---
 A C T G A G C T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A G C T A C T G C T G A A G T C A T C G C G A T A C T G
A C G T A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T