Information for 22-AGAGGTTTDDGGT (Motif 40)

C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T
Reverse Opposite:
C G T A A G T C A T G C G A C T G A T C C G T A C T G A C G T A A T G C A T G C A C G T G T A C A C G T
p-value:1e-7
log p-value:-1.723e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.2 +/- 18.8bp
Average Position of motif in Background45.3 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGAGGTTTDDGGT--
-----TTTGCGGTTT
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGTTTDDGGT
TAAGGCGTCTTG---
 A C G T A C G T C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAGGTTTDDGGT----
-GNNATTTGTCGTAANN
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAGGTTTDDGGT--
----GTCTGTGGTTT
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAGGTTTDDGGT--
AGGGGTCAGAGGTCA
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAGGTTTDDGGT---
----NNHTGTGGTTWN
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGGTTTDDGGT--
-GAGGTCAAAGGTCA
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGGTTTDDGGT----
AAAGGTCAAAGGTCAAC
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGAGGTTTDDGGT
---CCTTTGAWGT
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAGGTTTDDGGT--
-GAGGTCAAAGGTCA
 C G T A A C T G C G T A T A C G A T C G A C G T A G C T A C G T C A T G C G T A A T C G A C T G A C G T A C G T A C G T
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A