Information for 3-GCAGTGTGCT (Motif 33)

T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T
Reverse Opposite:
C G T A T C A G A G T C C G T A A G T C T C G A T G A C G A C T A T C G A G T C
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.834
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif315.5
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets53.4 +/- 26.5bp
Average Position of motif in Background49.4 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGTGCT-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAGTGTGCT
-CTTTGT---
 T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCAGTGTGCT---
-CAGTGTGGTCGC
 T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCAGTGTGCT---
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCAGTGTGCT---
---CTGTTCCTGG
 T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTGTGCT--
GTGCCGTGTGCAAA
 A C G T A C G T T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGTGTGCT
CCWTTGTYYB
 T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGTGTGCT
CCATTGTTTT
 T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCAGTGTGCT---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCAGTGTGCT---
-NNHTGTGGTTWN
 T C A G A T G C C T G A A C T G A G C T A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G