Information for 2-KCAWSATCACACCACW (Motif 3)

A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
Reverse Opposite:
C G T A A T C G C G A T A C T G A C T G G A C T A T C G C A G T T A C G T G C A C A G T A T C G C G T A A G C T A T C G T G C A
p-value:1e-13
log p-value:-3.224e+01
Information Content per bp:1.569
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif9.28%
Number of Background Sequences with motif1117.3
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets52.9 +/- 23.9bp
Average Position of motif in Background50.4 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:KCAWSATCACACCACW
---CNGTCACGCCAC-
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:KCAWSATCACACCACW
-----ATCACCCCAT-
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:KCAWSATCACACCACW
-----ATCACCCCAT-
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:KCAWSATCACACCACW
------TCACACCT--
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:KCAWSATCACACCACW
-----ATCACCCCAC-
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:KCAWSATCACACCACW
------TCACACCT--
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:KCAWSATCACACCACW
------TCACACCT--
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:KCAWSATCACACCACW
------TCACACCT--
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:KCAWSATCACACCACW
------TCACACCT--
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KCAWSATCACACCACW--
-ATAAATGACACCTATCA
 A C G T T A G C T C G A G C A T T A G C G T C A A C G T A T G C G T C A T A G C C T G A T G A C T A G C G C T A T A G C C G A T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A