Information for 15-TGTGTAGCTACTCCCT (Motif 28)

A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T
Reverse Opposite:
T C G A A T C G C A T G A T C G C G T A A C T G A G C T C G T A A C T G A G T C A G C T C G T A A G T C C G T A G T A C C G T A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 24.3bp
Average Position of motif in Background55.9 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTGTAGCTACTCCCT-
--AGATGCTRCTRCCHT
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTGTAGCTACTCCCT--
--GNNAGCTAATCCCCCN
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T
A C G T A C G T A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0123.1_Obox3/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTGTAGCTACTCCCT----
---ATAGTTAATCCCCCNNA
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGTGTAGCTACTCCCT---
--AATCGTTAATCCCTTTA
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTGTAGCTACTCCCT----
---NTAGTTAATCCCCTTAN
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTGTAGCTACTCCCT----
---NTTGTTAATCCCTCTNN
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGTGTAGCTACTCCCT----
---ATAGTTAATCCCCCTCA
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGTGTAGCTACTCCCT
------GCTAATCCCC
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGTGTAGCTACTCCCT
-----CNGTCCTCCC-
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGTGTAGCTACTCCCT---
----NRGCCCCRCCCHBNN
 A C G T A C T G A C G T A C T G A C G T C T G A A C T G A G T C A C G T C T G A G T A C A C G T A T G C G T A C A T G C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C