Information for 11-CCARCATGCTGGM (Motif 25)

A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C
Reverse Opposite:
A C T G A G T C G T A C C T G A C T A G G T A C C G T A A C G T A C T G A G T C A C G T C T A G A C T G
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.3 +/- 5.9bp
Average Position of motif in Background65.7 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCARCATGCTGGM
ATTTCCCAGVAKSCY---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCARCATGCTGGM--
----CATGCGGGTAC
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCARCATGCTGGM-
----CCTGCTGAGH
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCARCATGCTGGM
-CAAGATGGCGGC
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCARCATGCTGGM----
-NNNNATGCGGGTNNNN
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCARCATGCTGGM-
----TATGCGGGTA
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCARCATGCTGGM---
-TCNCCTGCTGNGNNN
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCARCATGCTGGM---
-NNTCCTGCTGTGNNN
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCARCATGCTGGM
-CAAGATGGCGGC
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCARCATGCTGGM-
--AAAATGCTGACT
 A G T C A G T C C G T A C T A G A G T C C G T A A C G T A C T G A G T C A G C T A C T G A C T G T G A C A C G T
A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T