Information for 9-GGACAGGACCATG (Motif 23)

A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
Reverse Opposite:
G T A C C G T A A G C T A C T G C T A G A G C T A G T C A G T C A C G T A C T G A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.854
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 28.9bp
Average Position of motif in Background48.9 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGACAGGACCATG
GGGCGGGACC---
 A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGACCATG
AGGTCAAGGTCA--
 A C G T A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGACCATG
TTGACAGC------
 A C G T A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGACAGGACCATG
-CACAGN------
 A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGACCATG
AGGTCAAGGTCA--
 A C G T A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGACCATG
TTGACAGG------
 A C G T A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGACAGGACCATG-
----AAAACAATGG
 A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGACAGGACCATG
---CAAGGHCANV
 A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGACAGGACCATG
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGACAGGACCATG
TRAGGTCA--------
 A C G T A C G T A C G T A C T G A C T G G T C A A G T C C G T A C T A G A C T G C T G A A G T C G T A C C T G A C G A T A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T