Information for 10-CACACRTGTGCACCGH (Motif 17)

G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
Reverse Opposite:
C A T G A T G C T C A G A T C G C G A T C T A G A G T C T C G A A G T C C T G A A G C T C T A G A C G T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.711
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.2 +/- 25.9bp
Average Position of motif in Background44.6 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CACACRTGTGCACCGH
NACATATGGN------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACACRTGTGCACCGH
AACACGTGTT------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACACRTGTGCACCGH
NACACGTGCN------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACACRTGTGCACCGH
-ACACGTGC-------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CACACRTGTGCACCGH
--CACGTGBN------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACACRTGTGCACCGH
ACCACGTGGTNN----
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACACRTGTGCACCGH
GNCACGTG--------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACACRTGTGCACCGH
-ACATATGG-------
 G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACACRTGTGCACCGH
TCACACCT---------
 A C G T G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACACRTGTGCACCGH
CCTCACCTG--------
 A C G T G T A C C G T A A G T C G T C A A G T C C T G A A G C T C T A G A G C T C T A G A G T C G C T A A T G C A G T C A T C G G T A C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T