Information for 3-CAGGGACYSTSYG (Motif 8)

A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
Reverse Opposite:
A G T C C T A G A T C G C G T A A T C G C T A G A C T G A C G T A T G C G T A C A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 21.4bp
Average Position of motif in Background59.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGGGACYSTSYG
CCAGGAACAG----
 A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGACYSTSYG
NRRGGGTCTT----
 A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGGGACYSTSYG
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGACYSTSYG
CACAGN---------
 A C G T A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGGGACYSTSYG
ACAGGAAGTG----
 A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGACYSTSYG
TCAGNGAGCGTGAC
 A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGGGACYSTSYG
--GGGAATTTCC-
 A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGACYSTSYG
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------CAGGGACYSTSYG
NNNNTGCCAGTGATTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CAGGGACYSTSYG
GGTTAGAGACCT----
 A C G T A C G T A C G T A G T C C G T A A C T G C A T G A T C G C G T A A G T C A G T C A T G C C G A T A T G C A G T C C T A G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T