Information for 4-TTWAATGTTRATAACT (Motif 7)

C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
Reverse Opposite:
C T G A C A T G C G A T C G A T C G T A A C G T A G T C C G T A C G T A G T A C C G T A A C G T C G A T C G A T C G T A C G T A
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.744
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.4 +/- 22.7bp
Average Position of motif in Background42.3 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTWAATGTTRATAACT
TTTAAT----------
 C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTWAATGTTRATAACT
NNTTTTACATGTANNNT---
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTWAATGTTRATAACT
NNTATTACATGTANNNT---
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTWAATGTTRATAACT
ANTNTTACATGTATNTA---
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTWAATGTTRATAACT
ANTNNTACATGTANNTN---
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTWAATGTTRATAACT
-CTAATATTGCTAAA-
 C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTWAATGTTRATAACT
-CTAATATTGCTAAA-
 C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTWAATGTTRATAACT
-TAATTGTTCTAAAC-
 C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTWAATGTTRATAACT
ANTATTACATGTANNNN---
 A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTWAATGTTRATAACT
--TTATGCAAATTA--
 C G A T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G A T T C A G T G C A G C A T C G T A C G T A G T A C A G C T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T