Information for 2-AAATGADCTCAGA (Motif 6)

C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
Reverse Opposite:
A G C T A G T C A G C T A C T G C G T A A C T G G T A C C G A T A T G C C G T A A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.7 +/- 21.2bp
Average Position of motif in Background32.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAATGADCTCAGA
AAGGCGAAATCATCGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAATGADCTCAGA
AAAGATGATGTCATC
 A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

PH0045.1_Hoxa1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAATGADCTCAGA
ACGGTAATTAGCTCAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAATGADCTCAGA
NTAATGAGCT----
 A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAATGADCTCAGA-
--ATGACGTCAYYN
 C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A A C G T
A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAATGADCTCAGA
NGATGACGTCAT-
 C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AAATGADCTCAGA
GAGGTAATTACCTCAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AAATGADCTCAGA
ANGNTAATTANCNCAN-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AAATGADCTCAGA
ANGNTAATTANCNCAN-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T

PH0174.1_Vax1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AAATGADCTCAGA
ACGTTAATTAACCCAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T A T C G C G T A C A T G G T A C A C G T A G T C C T G A A C T G C T G A
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G A C G T