p-value: | 1e-7 |
log p-value: | -1.652e+01 |
Information Content per bp: | 1.648 |
Number of Target Sequences with motif | 66.0 |
Percentage of Target Sequences with motif | 12.55% |
Number of Background Sequences with motif | 3030.7 |
Percentage of Background Sequences with motif | 6.22% |
Average Position of motif in Targets | 50.1 +/- 24.2bp |
Average Position of motif in Background | 49.5 +/- 31.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.15 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCAGGCTG CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGCAGGCTG-- DCHCAGCAGGRGGCC |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGCAGGCTG DCTCAGCAGG--- |
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PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CTGCAGGCTG AATCGCACTGCATTCCG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTGCAGGCTG- ---TWGTCTGV |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CTGCAGGCTG CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CTGCAGGCTG GAGCACAGCAGGACA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CTGCAGGCTG CCACACAGCAGGAGA |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTGCAGGCTG -----NGCTN |
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TFAP2B(var.2)/MA0812.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTGCAGGCTG AGCCTCAGGCA- |
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