Information for 12-TAGCGACGAWGAA (Motif 19)

C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A
Reverse Opposite:
G A C T A G C T A G T C G C A T C A G T A T G C C A T G G A C T A T G C C A T G A T G C C A G T G T C A
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.597
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.5 +/- 30.3bp
Average Position of motif in Background58.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGCGACGAWGAA---
-TCCGTCGCTTAAAAG
 C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A A C G T A C G T A C G T
A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGACGAWGAA
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCGACGAWGAA
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGAWGAA
CCGCATAGCAACGGA---
 A C G T A C G T A C G T A C G T A C G T C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TAGCGACGAWGAA----
TAAGGTCGTAAAATCCT
 C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TAGCGACGAWGAA----
-ATTTACGACAAATAGC
 C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----TAGCGACGAWGAA
TACCATAGCAACGGT---
 A C G T A C G T A C G T A C G T A C G T C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TAGCGACGAWGAA-
GAATGACGAATAAC
 C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:TAGCGACGAWGAA----
CAAGGTCGTAAAATCTT
 C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-TAGCGACGAWGAA--
TNAACGACGTCGNCCA
 A C G T C A G T G T C A T A C G G T A C A T C G C T G A G T A C T A C G G T C A C G T A T A C G C T G A C T G A A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A