Information for 10-RGGGCCTTGMAKK (Motif 17)

C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
Reverse Opposite:
G T C A T G C A C G A T A C G T A G T C C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G C T
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.6 +/- 17.4bp
Average Position of motif in Background38.6 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:RGGGCCTTGMAKK
-TGACCTTGAN--
 C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-RGGGCCTTGMAKK-
GCTGACCTTGAACTN
 A C G T C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-RGGGCCTTGMAKK
BNTGDCCTTG----
 A C G T C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:RGGGCCTTGMAKK
-TGACCTTGAV--
 C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RGGGCCTTGMAKK
-AGGCCTAG----
 C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RGGGCCTTGMAKK
ATGACCTTGAA--
 C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--RGGGCCTTGMAKK
NRRGGGTCTT-----
 A C G T A C G T C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RGGGCCTTGMAKK
-GGGAATTGTAGT
 C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RGGGCCTTGMAKK
-AGGCCTNG----
 C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----RGGGCCTTGMAKK
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C T G A A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C T G G T C A C G T A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A