Information for 7-GGAAVACDCACTT (Motif 12)

A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G A G C T A T C G G C A T A C T G A C G T A C T G A C G T A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.308e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 18.0bp
Average Position of motif in Background42.2 +/- 46.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAAVACDCACTT
TGGAAAA-------
 A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAAVACDCACTT
NNTGGAAANN------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAVACDCACTT
AATGGAAAAT------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAAVACDCACTT
GGAAANCCCC---
 A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAAVACDCACTT
AGAGGAA---------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGAAVACDCACTT--
-----MRSCACTYAA
 A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAAVACDCACTT
NATGGAAAAN------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAAVACDCACTT
ACCGGAAG--------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGAAVACDCACTT--
-----AAGCACTTAA
 A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAAVACDCACTT
CCAGGAACAG------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A T G A C C G T A G T A C C G A T A T G C C T G A A G T C A C G T A G C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T