Information for 15-TTTATTGCAATGT (Motif 28)

A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A G T C A C G T A
p-value:1e-4
log p-value:-9.652e+00
Information Content per bp:1.941
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 31.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX1/MA0878.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTGCAATGT
TTTTATTGC-----
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCAATGT
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTGCAATGT
TTTTATGGCTN---
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCAATGT
NTTTTATGAC-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCAATGT
NTTTTATTACN----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCAATGT
TTTTTATTGC-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TTTATTGCAATGT
NTNAATTTTATTGNATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCAATGT
TTTTTATTGG-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTATTGCAATGT
NTTTTATTGG-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATTGCAATGT
NNANTTTTATTGGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G G T A C G T C A C G T A A C G T A C T G A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T