Information for 10-GCAAGAAAGGATT (Motif 20)

T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T
Reverse Opposite:
G T C A G T C A A C G T A G T C G T A C A C G T G A C T A G C T A G T C A G C T C A G T T C A G A G T C
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.737
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif58.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets52.6 +/- 25.4bp
Average Position of motif in Background44.3 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dmbx1/MA0883.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCAAGAAAGGATT------
--TGAACCGGATTAATGAA
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCAAGAAAGGATT------
--TGAACCGGATTAATGAA
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCAAGAAAGGATT----
--AAAAACGGATTATTG
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCAAGAAAGGATT--
----AAGAGGATTAG
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GCAAGAAAGGATT---
------VRGGATTARN
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCAAGAAAGGATT-------
---TGAAGGGATTAATCATC
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCAAGAAAGGATT-------
---AGAGGGGATTAATTTAT
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCAAGAAAGGATT--
-------NGGATTAA
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAAGAAAGGATT-------
---NANAGGGATTAATTATN
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAAGAAAGGATT-------
---TGTAGGGATTAATTGTC
 T A C G A G T C G C T A C T G A C T A G C T G A C T G A G T C A A C T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C