Information for 4-ATAMGTGGTT (Motif 17)

C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C A G T C C G T A A G T C A C T G A C G T G C T A C G A T
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.734
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif416.4
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets55.7 +/- 26.4bp
Average Position of motif in Background50.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0004.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ATAMGTGGTT---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ATAMGTGGTT--
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ATAMGTGGTT---
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATAMGTGGTT-
-NNTGTGGTTT
 C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATAMGTGGTT
TTAAGTGGT-
 C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATAMGTGGTT
TTAAGTGGN-
 C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATAMGTGGTT--
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAMGTGGTT---
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATAMGTGGTT--
--CTGTGGTTTN
 C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATAMGTGGTT--
NNHTGTGGTTWN
 C G T A C G A T G T C A T G A C T C A G C G A T A C T G A C T G A G C T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G