Information for 2-TYCMRWGCYRACAKAG (Motif 6)

A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T G T A C A C G T A C T G A C G T A G T C C T G A A C T G A G T C C G A T G A C T A C T G A C T G C T A G C G T A
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.829
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 29.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TYCMRWGCYRACAKAG
-----TGCTGACTCA-
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TYCMRWGCYRACAKAG
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TYCMRWGCYRACAKAG
---GGTGYTGACAGS-
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:TYCMRWGCYRACAKAG
----------ACAAAG
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TYCMRWGCYRACAKAG-
AAATTTGCTGACTTAGA
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TYCMRWGCYRACAKAG-
-------VRRACAAWGG
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TYCMRWGCYRACAKAG
TTGCCATGGCAACC---
 A C G T A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TYCMRWGCYRACAKAG
TTGCCATGGCAACN---
 A C G T A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TYCMRWGCYRACAKAG
-------TTGACAG--
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TYCMRWGCYRACAKAG------
----------ACAAAGGNBCCT
 A C G T A G T C A G T C G T A C C T G A G C A T A C T G A G T C A G C T C T A G C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T