Information for 2-CAMACAACAAATC (Motif 2)

A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
Reverse Opposite:
A C T G G T C A A G C T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C T G
p-value:1e-12
log p-value:-2.964e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 20.4bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAMACAACAAATC
AACAAACAACAAGAG
 A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAMACAACAAATC-
AAAAATAACAAACGG
 A C G T A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAMACAACAAATC
ATGTCACAACAACAC
 A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAMACAACAAATC
CGAAGCACACAAAATA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAMACAACAAATC--
CAAACAACAACACCT
 A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAMACAACAAATC
---RNAACAATGG
 A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAMACAACAAATC
-AAACCACANN--
 A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CAMACAACAAATC
-----AACAAT--
 A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAMACAACAAATC-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAMACAACAAATC
NAAACCACAG---
 A G T C C G T A G T A C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C G T G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T